BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004E12LP1|AL425269
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1423 1730 0.0
>3x_Contig1423
Length = 8454
Score = 1730 bits (868), Expect = 0.0
Identities = 889/898 (98%), Gaps = 2/898 (0%)
Strand = Plus / Minus
Query: 1 gttgtcccattggaagaaaagattttggaacaatgtaagtttggtccaaaatgtaccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6556 gttgtcccattggaagaaaagattttggaacaatgtaagtttggtccaaaatgtaccaat 6497
Query: 61 aaaaattgtccaaagagacacgcaaggtcgtcaatcatgtgccgcgagggtgcgcaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6496 aaaaattgtccaaagagacacgcaaggtcgtcaatcatgtgccgcgagggtgcgcaatgt 6437
Query: 121 acaagaatagactgcctcttcggtcaccctatcaatgaaccttgtaggtacggggctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6436 acaagaatagactgcctcttcggtcaccctatcaatgaaccttgtaggtacggggctgaa 6377
Query: 181 tgtagaacatacggatgtttattccagcatcctccagaaagggtattgcctgaaaagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6376 tgtagaacatacggatgtttattccagcatcctccagaaagggtattgcctgaaaagcca 6317
Query: 241 aaaaagcctgatacagaaaacaccaacggtatttggttcaatccgcagctgattggaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6316 aaaaagcctgatacagaaaacaccaacggtatttggttcaatccgcagctgattggaagt 6257
Query: 301 ggaaattcctcgagtaacgagagaccatttgctgtaccagaatctaacgtacagtcagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6256 ggaaattcctcgagtaacgagagaccatttgctgtaccagaatctaacgtacagtcagtt 6197
Query: 361 catgctggacaagaagtagatggcgatgctatgatgatgagttaacattccaatctactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6196 catgctggacaagaagtagatggcgatgctatgatgatgagttaacattccaatctactc 6137
Query: 421 cgctctatttaatggtgatatccttaactgttttatttgaattattattatagtgttata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6136 cgctctatttaatggtgatatccttaactgttttatttgaattattattatagtgttata 6077
Query: 481 tctattaattattaaaaaaaaaaaaagtcttaaaaggtaaaaaaatactgtaaagtaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6076 tctattaattattaaaaaaaaaaaaagtcttaaaaggtaaaaaaatactgtaaagtaata 6017
Query: 541 aaaaaaaaaggtcaaccggaagaaagactactgtaaaaaagagactggcagtgtttaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6016 aaaaaaaaaggtcaaccggaagaaagactactgtaaaaaagagactggcagtgtttaaat 5957
Query: 601 tccagaagcctattaatatgattggcgtatcttgacctgtactctaatggtcatataaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5956 tccagaagcctattaatatgattggcgtatcttgacctgtactctaatggtcatataaga 5897
Query: 661 gaaatcccttttaccttgattttatcactatmtmttttttttaccatatgtctttttctc 720
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 5896 gaaatcccttttaccttgattttatcactatctcttttttttaccatatgtctttttctc 5837
Query: 721 tggtttttcttgctacg-agtgtataggacagtcatatagttt-cccttagttagtttgt 778
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5836 tggtttttcttgctacgaagtgtataggacagtcatatagtttccccttagttagtttgt 5777
Query: 779 camgtatattgatmatttattatgatmgatcmtaaagggttaaggtcaattataatgagt 838
|| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 5776 cacgtatattgatcatttattatgatcgatcctaaagggttaaggtcaattataatgagt 5717
Query: 839 gtgaatatatatgatatgtagcttgtgaagagaagaggaamaattggtaaaatgtcaa 896
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5716 gtgaatatatatgatatgtagcttgtgaagagaagaggaacaattggtaaaatgtcaa 5659
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,577
Number of Sequences: 1807
Number of extensions: 15577
Number of successful extensions: 173
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)